Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Mir5131-201ENSMUST00000175426 93 ntBASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gm27628-201ENSMUST00000184911 107 ntBASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gm15590-201ENSMUST00000078419 552 ntBASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ctdnep1Q3TP92 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.5■□□□□ 0.39
Ctdnep1Q3TP92 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gm43767-201ENSMUST00000198933 381 ntBASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gm18246-201ENSMUST00000221023 728 ntBASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctdnep1Q3TP92 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Mir5126-201ENSMUST00000175513 77 ntBASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Ctdnep1Q3TP92 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms