Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Gm27357-201ENSMUST00000183754 135 ntBASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim43aQ3TL54 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gm18669-201ENSMUST00000216049 778 ntBASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.11■□□□□ 0.17
Trim43aQ3TL54 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.11■□□□□ 0.17
Trim43aQ3TL54 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Gm19164-201ENSMUST00000210667 640 ntBASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.1■□□□□ 0.17
Trim43aQ3TL54 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
Trim43aQ3TL54 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim43aQ3TL54 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.09■□□□□ 0.17
Trim43aQ3TL54 Gm9172-201ENSMUST00000212092 954 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms