Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Q3KNL4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.94□□□□□ -0.02
Q3KNL4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Q3KNL4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Q3KNL4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.93□□□□□ -0.02
Q3KNL4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Q3KNL4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.93□□□□□ -0.02
Q3KNL4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.93□□□□□ -0.02
Q3KNL4 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.93□□□□□ -0.02
Q3KNL4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.93□□□□□ -0.02
Q3KNL4 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.93□□□□□ -0.02
Q3KNL4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.93□□□□□ -0.02
Q3KNL4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Q3KNL4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Q3KNL4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Q3KNL4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.93□□□□□ -0.02
Q3KNL4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.93□□□□□ -0.02
Q3KNL4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Q3KNL4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Q3KNL4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Q3KNL4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Q3KNL4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.92□□□□□ -0.02
Q3KNL4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.92□□□□□ -0.02
Q3KNL4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Q3KNL4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.92□□□□□ -0.02
Q3KNL4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.92□□□□□ -0.02
Q3KNL4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.92□□□□□ -0.02
Q3KNL4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Q3KNL4 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.92□□□□□ -0.02
Q3KNL4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.92□□□□□ -0.02
Q3KNL4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.92□□□□□ -0.02
Q3KNL4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Q3KNL4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Q3KNL4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Q3KNL4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.91□□□□□ -0.02
Q3KNL4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Q3KNL4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms