Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nhej1Q3KNJ2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nhej1Q3KNJ2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Gm7506-201ENSMUST00000207758 815 ntBASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Gm8655-201ENSMUST00000221159 852 ntBASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nhej1Q3KNJ2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Gm12134-201ENSMUST00000122109 520 ntBASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nhej1Q3KNJ2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Gm15372-201ENSMUST00000120729 834 ntBASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nhej1Q3KNJ2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.17■□□□□ 0.18
Nhej1Q3KNJ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms