Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim63Q38HM4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim63Q38HM4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.54□□□□□ -0.4
Trim63Q38HM4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.54□□□□□ -0.4
Trim63Q38HM4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim63Q38HM4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.53□□□□□ -0.4
Trim63Q38HM4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.53□□□□□ -0.4
Trim63Q38HM4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.53□□□□□ -0.4
Trim63Q38HM4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Zfp783-201ENSMUST00000095946 670 ntBASIC12.53□□□□□ -0.4
Trim63Q38HM4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.53□□□□□ -0.4
Trim63Q38HM4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trim63Q38HM4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms