Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Gm13047-201ENSMUST00000117116 815 ntBASIC13.46□□□□□ -0.25
Chd8Q09XV5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.46□□□□□ -0.25
Chd8Q09XV5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.46□□□□□ -0.25
Chd8Q09XV5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chd8Q09XV5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Gm7287-201ENSMUST00000205267 602 ntBASIC13.46□□□□□ -0.26
Chd8Q09XV5 Gm19309-201ENSMUST00000218295 205 ntBASIC13.46□□□□□ -0.26
Chd8Q09XV5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chd8Q09XV5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.45□□□□□ -0.26
Chd8Q09XV5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chd8Q09XV5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.45□□□□□ -0.26
Chd8Q09XV5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.45□□□□□ -0.26
Chd8Q09XV5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Gm8318-201ENSMUST00000182954 872 ntBASIC13.45□□□□□ -0.26
Chd8Q09XV5 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.45□□□□□ -0.26
Chd8Q09XV5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chd8Q09XV5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chd8Q09XV5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.43□□□□□ -0.26
Chd8Q09XV5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms