Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC23.03■■□□□ 1.28
Col17a1Q07563 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Col17a1Q07563 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC23.03■■□□□ 1.28
Col17a1Q07563 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col17a1Q07563 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col17a1Q07563 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col17a1Q07563 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
Col17a1Q07563 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col17a1Q07563 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col17a1Q07563 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC23.02■■□□□ 1.28
Col17a1Q07563 Gm9826-201ENSMUST00000029124 1299 ntBASIC23.02■■□□□ 1.28
Col17a1Q07563 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col17a1Q07563 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC23.02■■□□□ 1.27
Col17a1Q07563 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col17a1Q07563 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col17a1Q07563 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col17a1Q07563 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC23.01■■□□□ 1.27
Col17a1Q07563 Gm15429-201ENSMUST00000151268 798 ntBASIC23.01■■□□□ 1.27
Col17a1Q07563 Gm18916-201ENSMUST00000198264 1246 ntBASIC23.01■■□□□ 1.27
Col17a1Q07563 Gm43818-201ENSMUST00000200605 466 ntBASIC23.01■■□□□ 1.27
Col17a1Q07563 Gm45865-201ENSMUST00000211815 945 ntBASIC23.01■■□□□ 1.27
Col17a1Q07563 Gm17823-201ENSMUST00000217830 1006 ntBASIC23.01■■□□□ 1.27
Col17a1Q07563 AC121804.3-201ENSMUST00000223420 295 ntBASIC23.01■■□□□ 1.27
Col17a1Q07563 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col17a1Q07563 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col17a1Q07563 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col17a1Q07563 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC23■■□□□ 1.27
Col17a1Q07563 Gm2639-201ENSMUST00000156881 1297 ntBASIC23■■□□□ 1.27
Col17a1Q07563 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC23■■□□□ 1.27
Col17a1Q07563 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col17a1Q07563 Gm44207-201ENSMUST00000204568 1424 ntBASIC23■■□□□ 1.27
Col17a1Q07563 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Col17a1Q07563 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col17a1Q07563 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col17a1Q07563 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col17a1Q07563 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col17a1Q07563 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC23■■□□□ 1.27
Col17a1Q07563 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC22.99■■□□□ 1.27
Col17a1Q07563 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Gm11793-201ENSMUST00000120433 981 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 Gm15393-201ENSMUST00000120499 219 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Gm7895-201ENSMUST00000187459 1173 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 Gm8099-201ENSMUST00000200510 742 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Col17a1Q07563 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC22.99■■□□□ 1.27
Col17a1Q07563 AC164567.1-201ENSMUST00000219185 960 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 AC155258.1-201ENSMUST00000219303 253 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Col17a1Q07563 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC22.99■■□□□ 1.27
Col17a1Q07563 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Gm5763-201ENSMUST00000155951 1530 ntBASIC22.99■■□□□ 1.27
Col17a1Q07563 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col17a1Q07563 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Col17a1Q07563 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Col17a1Q07563 Gm9333-201ENSMUST00000205452 1323 ntBASIC22.98■■□□□ 1.27
Col17a1Q07563 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC22.98■■□□□ 1.27
Col17a1Q07563 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Col17a1Q07563 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col17a1Q07563 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC22.98■■□□□ 1.27
Col17a1Q07563 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Col17a1Q07563 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col17a1Q07563 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC22.97■■□□□ 1.27
Col17a1Q07563 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col17a1Q07563 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col17a1Q07563 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC22.97■■□□□ 1.27
Col17a1Q07563 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Col17a1Q07563 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col17a1Q07563 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col17a1Q07563 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col17a1Q07563 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms