Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.74□□□□□ -0.53
Cdx4Q07424 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Gm25990-201ENSMUST00000102440 86 ntBASIC11.74□□□□□ -0.53
Cdx4Q07424 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Gm8097-201ENSMUST00000117903 829 ntBASIC11.74□□□□□ -0.53
Cdx4Q07424 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdx4Q07424 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdx4Q07424 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdx4Q07424 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm13418-201ENSMUST00000119097 944 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm7230-201ENSMUST00000173026 815 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm8825-201ENSMUST00000182565 998 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm4518-201ENSMUST00000182638 718 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdx4Q07424 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.73□□□□□ -0.53
Cdx4Q07424 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdx4Q07424 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdx4Q07424 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdx4Q07424 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdx4Q07424 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms