Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.91■□□□□ 0.62
Smarcc1P97496 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.91■□□□□ 0.62
Smarcc1P97496 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smarcc1P97496 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcc1P97496 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcc1P97496 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Smarcc1P97496 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Smarcc1P97496 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Gm12490-201ENSMUST00000120255 560 ntBASIC18.9■□□□□ 0.62
Smarcc1P97496 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcc1P97496 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcc1P97496 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.9■□□□□ 0.62
Smarcc1P97496 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smarcc1P97496 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcc1P97496 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smarcc1P97496 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Smarcc1P97496 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Smarcc1P97496 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.89■□□□□ 0.62
Smarcc1P97496 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Smarcc1P97496 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smarcc1P97496 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Smarcc1P97496 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Smarcc1P97496 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcc1P97496 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcc1P97496 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcc1P97496 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc1P97496 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc1P97496 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcc1P97496 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc1P97496 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.88■□□□□ 0.61
Smarcc1P97496 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc1P97496 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.88■□□□□ 0.61
Smarcc1P97496 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc1P97496 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarcc1P97496 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc1P97496 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smarcc1P97496 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.87■□□□□ 0.61
Smarcc1P97496 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcc1P97496 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.87■□□□□ 0.61
Smarcc1P97496 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.87■□□□□ 0.61
Smarcc1P97496 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.87■□□□□ 0.61
Smarcc1P97496 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcc1P97496 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcc1P97496 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc1P97496 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms