Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Gbx1P82976 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gbx1P82976 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gbx1P82976 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Gbx1P82976 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gbx1P82976 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Gbx1P82976 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gbx1P82976 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gbx1P82976 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gbx1P82976 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gbx1P82976 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gbx1P82976 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.27□□□□□ -0.12
Gbx1P82976 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Gbx1P82976 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.27□□□□□ -0.13
Gbx1P82976 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Gm27646-201ENSMUST00000183989 110 ntBASIC14.27□□□□□ -0.13
Gbx1P82976 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gbx1P82976 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Gbx1P82976 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gbx1P82976 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.26□□□□□ -0.13
Gbx1P82976 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.26□□□□□ -0.13
Gbx1P82976 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.26□□□□□ -0.13
Gbx1P82976 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.26□□□□□ -0.13
Gbx1P82976 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.26□□□□□ -0.13
Gbx1P82976 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
Gbx1P82976 Ank2-226ENSMUST00000189368 339 ntBASIC14.26□□□□□ -0.13
Gbx1P82976 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.26□□□□□ -0.13
Gbx1P82976 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.26□□□□□ -0.13
Gbx1P82976 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.26□□□□□ -0.13
Gbx1P82976 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gbx1P82976 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gbx1P82976 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gbx1P82976 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gbx1P82976 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.25□□□□□ -0.13
Gbx1P82976 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Gbx1P82976 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Gbx1P82976 Gm11780-201ENSMUST00000136880 516 ntBASIC14.25□□□□□ -0.13
Gbx1P82976 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gbx1P82976 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.25□□□□□ -0.13
Gbx1P82976 Gm7977-201ENSMUST00000193787 748 ntBASIC14.25□□□□□ -0.13
Gbx1P82976 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gbx1P82976 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gbx1P82976 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gbx1P82976 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gbx1P82976 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gbx1P82976 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms