Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.75□□□□□ -0.37
SgcaP82350 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SgcaP82350 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.75□□□□□ -0.37
SgcaP82350 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SgcaP82350 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.75□□□□□ -0.37
SgcaP82350 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SgcaP82350 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.75□□□□□ -0.37
SgcaP82350 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SgcaP82350 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SgcaP82350 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SgcaP82350 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.74□□□□□ -0.37
SgcaP82350 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.74□□□□□ -0.37
SgcaP82350 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.74□□□□□ -0.37
SgcaP82350 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.74□□□□□ -0.37
SgcaP82350 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.74□□□□□ -0.37
SgcaP82350 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.74□□□□□ -0.37
SgcaP82350 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SgcaP82350 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SgcaP82350 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SgcaP82350 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SgcaP82350 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
SgcaP82350 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.73□□□□□ -0.37
SgcaP82350 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SgcaP82350 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.73□□□□□ -0.37
SgcaP82350 Gm21814-202ENSMUST00000203277 873 ntBASIC12.73□□□□□ -0.37
SgcaP82350 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.73□□□□□ -0.37
SgcaP82350 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.73□□□□□ -0.37
SgcaP82350 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.73□□□□□ -0.37
SgcaP82350 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SgcaP82350 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.72□□□□□ -0.37
SgcaP82350 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.72□□□□□ -0.37
SgcaP82350 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms