Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SgcbP82349 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.53□□□□□ -0.24
SgcbP82349 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.53□□□□□ -0.24
SgcbP82349 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SgcbP82349 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.53□□□□□ -0.24
SgcbP82349 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.53□□□□□ -0.24
SgcbP82349 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SgcbP82349 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SgcbP82349 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
SgcbP82349 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SgcbP82349 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SgcbP82349 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SgcbP82349 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.52□□□□□ -0.25
SgcbP82349 Gm15467-201ENSMUST00000120582 445 ntBASIC13.52□□□□□ -0.25
SgcbP82349 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.52□□□□□ -0.25
SgcbP82349 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SgcbP82349 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.52□□□□□ -0.25
SgcbP82349 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.52□□□□□ -0.25
SgcbP82349 Gm9727-201ENSMUST00000161387 555 ntBASIC13.52□□□□□ -0.25
SgcbP82349 Gm27300-201ENSMUST00000184085 97 ntBASIC13.52□□□□□ -0.25
SgcbP82349 Gm27525-201ENSMUST00000184465 107 ntBASIC13.52□□□□□ -0.25
SgcbP82349 Gm27335-201ENSMUST00000184758 97 ntBASIC13.52□□□□□ -0.25
SgcbP82349 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.52□□□□□ -0.25
SgcbP82349 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SgcbP82349 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.51□□□□□ -0.25
SgcbP82349 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SgcbP82349 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.51□□□□□ -0.25
SgcbP82349 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.51□□□□□ -0.25
SgcbP82349 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.51□□□□□ -0.25
SgcbP82349 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SgcbP82349 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.51□□□□□ -0.25
SgcbP82349 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SgcbP82349 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SgcbP82349 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SgcbP82349 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SgcbP82349 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.5□□□□□ -0.25
SgcbP82349 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.5□□□□□ -0.25
SgcbP82349 Gm18246-201ENSMUST00000221023 728 ntBASIC13.5□□□□□ -0.25
SgcbP82349 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms