Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Birc2-201ENSMUST00000054878 378 ntBASIC13.4□□□□□ -0.26
Sec61a1P61620 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sec61a1P61620 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sec61a1P61620 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Sec61a1P61620 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Gm27867-201ENSMUST00000184778 125 ntBASIC13.39□□□□□ -0.27
Sec61a1P61620 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.39□□□□□ -0.27
Sec61a1P61620 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.39□□□□□ -0.27
Sec61a1P61620 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sec61a1P61620 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sec61a1P61620 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.38□□□□□ -0.27
Sec61a1P61620 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Rprl3-201ENSMUST00000157400 290 ntBASIC13.38□□□□□ -0.27
Sec61a1P61620 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm27459-201ENSMUST00000184860 107 ntBASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm43347-201ENSMUST00000200226 580 ntBASIC13.38□□□□□ -0.27
Sec61a1P61620 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.38□□□□□ -0.27
Sec61a1P61620 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.38□□□□□ -0.27
Sec61a1P61620 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.38□□□□□ -0.27
Sec61a1P61620 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sec61a1P61620 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.37□□□□□ -0.27
Sec61a1P61620 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.37□□□□□ -0.27
Sec61a1P61620 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.37□□□□□ -0.27
Sec61a1P61620 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sec61a1P61620 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms