Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.85□□□□□ -0.67
Cks1bP61025 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cks1bP61025 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm18115-201ENSMUST00000221209 621 ntBASIC10.85□□□□□ -0.67
Cks1bP61025 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.85□□□□□ -0.67
Cks1bP61025 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cks1bP61025 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Cks1bP61025 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cks1bP61025 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cks1bP61025 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Cks1bP61025 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cks1bP61025 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cks1bP61025 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cks1bP61025 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cks1bP61025 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Gm12527-201ENSMUST00000117967 564 ntBASIC10.84□□□□□ -0.67
Cks1bP61025 Gm13186-201ENSMUST00000118031 316 ntBASIC10.84□□□□□ -0.67
Cks1bP61025 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cks1bP61025 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.84□□□□□ -0.67
Cks1bP61025 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.84□□□□□ -0.67
Cks1bP61025 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1bP61025 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cks1bP61025 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cks1bP61025 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cks1bP61025 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cks1bP61025 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.83□□□□□ -0.68
Cks1bP61025 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1bP61025 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Cks1bP61025 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.83□□□□□ -0.68
Cks1bP61025 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.83□□□□□ -0.68
Cks1bP61025 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.83□□□□□ -0.68
Cks1bP61025 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms