Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup43P59235 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.34□□□□□ -0.11
Nup43P59235 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup43P59235 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.34□□□□□ -0.11
Nup43P59235 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Nup43P59235 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
Nup43P59235 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup43P59235 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup43P59235 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nup43P59235 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup43P59235 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup43P59235 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nup43P59235 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup43P59235 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.33□□□□□ -0.12
Nup43P59235 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.33□□□□□ -0.12
Nup43P59235 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nup43P59235 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup43P59235 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.33□□□□□ -0.12
Nup43P59235 Gm5364-201ENSMUST00000216789 889 ntBASIC14.33□□□□□ -0.12
Nup43P59235 Gm18246-201ENSMUST00000221023 728 ntBASIC14.33□□□□□ -0.12
Nup43P59235 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.33□□□□□ -0.12
Nup43P59235 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nup43P59235 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nup43P59235 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup43P59235 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup43P59235 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Nup43P59235 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 BC037039-201ENSMUST00000192003 2205 ntBASIC14.32□□□□□ -0.12
Nup43P59235 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup43P59235 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Gm6443-201ENSMUST00000203599 874 ntBASIC14.32□□□□□ -0.12
Nup43P59235 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Nup43P59235 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nup43P59235 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup43P59235 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.32□□□□□ -0.12
Nup43P59235 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.32□□□□□ -0.12
Nup43P59235 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup43P59235 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nup43P59235 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nup43P59235 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nup43P59235 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Nup43P59235 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nup43P59235 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Nup43P59235 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.31□□□□□ -0.12
Nup43P59235 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup43P59235 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.31□□□□□ -0.12
Nup43P59235 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.31□□□□□ -0.12
Nup43P59235 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.31□□□□□ -0.12
Nup43P59235 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nup43P59235 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms