Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp25P57080 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp25P57080 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Usp25P57080 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Usp25P57080 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.2■□□□□ 0.34
Usp25P57080 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp25P57080 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp25P57080 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp25P57080 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Usp25P57080 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.2■□□□□ 0.34
Usp25P57080 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Usp25P57080 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp25P57080 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp25P57080 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp25P57080 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Usp25P57080 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm8825-201ENSMUST00000182565 998 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm4518-201ENSMUST00000182638 718 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp25P57080 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp25P57080 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp25P57080 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.19■□□□□ 0.34
Usp25P57080 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp25P57080 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp25P57080 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp25P57080 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp25P57080 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp25P57080 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp25P57080 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.18■□□□□ 0.34
Usp25P57080 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp25P57080 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Usp25P57080 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp25P57080 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp25P57080 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp25P57080 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms