Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.23■□□□□ 0.03
SmoP56726 Rpph1-201ENSMUST00000175096 319 ntBASIC15.23■□□□□ 0.03
SmoP56726 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.23■□□□□ 0.03
SmoP56726 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SmoP56726 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.23■□□□□ 0.03
SmoP56726 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SmoP56726 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.23■□□□□ 0.03
SmoP56726 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SmoP56726 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SmoP56726 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SmoP56726 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.22■□□□□ 0.03
SmoP56726 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.22■□□□□ 0.03
SmoP56726 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.22■□□□□ 0.03
SmoP56726 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SmoP56726 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.22■□□□□ 0.03
SmoP56726 Gm45612-201ENSMUST00000211320 160 ntBASIC15.22■□□□□ 0.03
SmoP56726 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SmoP56726 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
SmoP56726 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.22■□□□□ 0.03
SmoP56726 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SmoP56726 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.21■□□□□ 0.03
SmoP56726 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.21■□□□□ 0.03
SmoP56726 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.21■□□□□ 0.03
SmoP56726 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SmoP56726 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SmoP56726 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SmoP56726 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SmoP56726 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SmoP56726 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SmoP56726 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.2■□□□□ 0.02
SmoP56726 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.2■□□□□ 0.02
SmoP56726 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.2■□□□□ 0.02
SmoP56726 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.2■□□□□ 0.02
SmoP56726 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.2■□□□□ 0.02
SmoP56726 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.2■□□□□ 0.02
SmoP56726 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.2■□□□□ 0.02
SmoP56726 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SmoP56726 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SmoP56726 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms