Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.86□□□□□ -0.19
Cdh11P55288 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Gm18195-201ENSMUST00000207604 706 ntBASIC13.86□□□□□ -0.19
Cdh11P55288 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cdh11P55288 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdh11P55288 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdh11P55288 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdh11P55288 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.85□□□□□ -0.19
Cdh11P55288 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdh11P55288 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdh11P55288 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Rps4l-201ENSMUST00000071745 943 ntBASIC13.85□□□□□ -0.19
Cdh11P55288 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cdh11P55288 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh11P55288 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdh11P55288 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Cdh11P55288 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdh11P55288 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cdh11P55288 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdh11P55288 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.84□□□□□ -0.19
Cdh11P55288 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh11P55288 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh11P55288 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh11P55288 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh11P55288 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh11P55288 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdh11P55288 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.83□□□□□ -0.2
Cdh11P55288 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdh11P55288 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.83□□□□□ -0.2
Cdh11P55288 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.83□□□□□ -0.2
Cdh11P55288 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
Cdh11P55288 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh11P55288 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh11P55288 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms