Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.33■□□□□ 0.2
Nub1P54729 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nub1P54729 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.33■□□□□ 0.2
Nub1P54729 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.33■□□□□ 0.2
Nub1P54729 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.33■□□□□ 0.2
Nub1P54729 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nub1P54729 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Nub1P54729 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.32■□□□□ 0.2
Nub1P54729 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.32■□□□□ 0.2
Nub1P54729 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.32■□□□□ 0.2
Nub1P54729 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.32■□□□□ 0.2
Nub1P54729 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Gm10499-201ENSMUST00000174094 934 ntBASIC16.32■□□□□ 0.2
Nub1P54729 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.32■□□□□ 0.2
Nub1P54729 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.32■□□□□ 0.2
Nub1P54729 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nub1P54729 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nub1P54729 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.32■□□□□ 0.2
Nub1P54729 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nub1P54729 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nub1P54729 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nub1P54729 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Nub1P54729 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.31■□□□□ 0.2
Nub1P54729 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.31■□□□□ 0.2
Nub1P54729 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nub1P54729 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.31■□□□□ 0.2
Nub1P54729 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nub1P54729 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.31■□□□□ 0.2
Nub1P54729 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nub1P54729 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nub1P54729 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Nub1P54729 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.3■□□□□ 0.2
Nub1P54729 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nub1P54729 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.3■□□□□ 0.2
Nub1P54729 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.3■□□□□ 0.2
Nub1P54729 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nub1P54729 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.3■□□□□ 0.2
Nub1P54729 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nub1P54729 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.3■□□□□ 0.2
Nub1P54729 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nub1P54729 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.29■□□□□ 0.2
Nub1P54729 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nub1P54729 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nub1P54729 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nub1P54729 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms