Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Msh6P54276 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Gm11543-201ENSMUST00000120758 370 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.13■□□□□ 0.65
Msh6P54276 Gm25144-201ENSMUST00000179561 110 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Gm25352-201ENSMUST00000179815 110 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Gm28630-201ENSMUST00000187806 498 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Gm6888-201ENSMUST00000221983 706 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Msh6P54276 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.13■□□□□ 0.65
Msh6P54276 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh6P54276 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.13■□□□□ 0.65
Msh6P54276 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.12■□□□□ 0.65
Msh6P54276 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Msh6P54276 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh6P54276 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Msh6P54276 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Msh6P54276 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.11■□□□□ 0.65
Msh6P54276 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.11■□□□□ 0.65
Msh6P54276 Gm13823-201ENSMUST00000119930 345 ntBASIC19.11■□□□□ 0.65
Msh6P54276 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.11■□□□□ 0.65
Msh6P54276 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.11■□□□□ 0.65
Msh6P54276 Gm38225-201ENSMUST00000194001 393 ntBASIC19.11■□□□□ 0.65
Msh6P54276 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.11■□□□□ 0.65
Msh6P54276 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Msh6P54276 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 BC037039-201ENSMUST00000192003 2205 ntBASIC19.11■□□□□ 0.65
Msh6P54276 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh6P54276 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Msh6P54276 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Msh6P54276 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Msh6P54276 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.1■□□□□ 0.65
Msh6P54276 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Msh6P54276 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Msh6P54276 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Msh6P54276 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Msh6P54276 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh6P54276 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Msh6P54276 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Msh6P54276 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.09■□□□□ 0.65
Msh6P54276 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.09■□□□□ 0.65
Msh6P54276 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.09■□□□□ 0.65
Msh6P54276 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.09■□□□□ 0.65
Msh6P54276 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh6P54276 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Msh6P54276 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms