Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtbrP50284 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtbrP50284 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtbrP50284 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LtbrP50284 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.79■□□□□ 0.44
LtbrP50284 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LtbrP50284 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.79■□□□□ 0.44
LtbrP50284 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LtbrP50284 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
LtbrP50284 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LtbrP50284 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.79■□□□□ 0.44
LtbrP50284 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.79■□□□□ 0.44
LtbrP50284 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LtbrP50284 Syt7-205ENSMUST00000224135 1557 ntBASIC17.79■□□□□ 0.44
LtbrP50284 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LtbrP50284 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.78■□□□□ 0.44
LtbrP50284 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LtbrP50284 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Grk6-207ENSMUST00000225925 2769 ntBASIC17.78■□□□□ 0.44
LtbrP50284 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.78■□□□□ 0.44
LtbrP50284 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.78■□□□□ 0.44
LtbrP50284 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.78■□□□□ 0.44
LtbrP50284 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.78■□□□□ 0.44
LtbrP50284 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.78■□□□□ 0.44
LtbrP50284 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.78■□□□□ 0.44
LtbrP50284 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.78■□□□□ 0.44
LtbrP50284 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.78■□□□□ 0.44
LtbrP50284 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LtbrP50284 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LtbrP50284 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
LtbrP50284 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.77■□□□□ 0.44
LtbrP50284 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.77■□□□□ 0.44
LtbrP50284 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LtbrP50284 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.77■□□□□ 0.44
LtbrP50284 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.77■□□□□ 0.44
LtbrP50284 Gm16215-201ENSMUST00000161990 637 ntBASIC17.77■□□□□ 0.44
LtbrP50284 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LtbrP50284 Gm44855-201ENSMUST00000205725 362 ntBASIC17.77■□□□□ 0.44
LtbrP50284 Gm6888-201ENSMUST00000221983 706 ntBASIC17.77■□□□□ 0.44
LtbrP50284 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LtbrP50284 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LtbrP50284 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
LtbrP50284 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
LtbrP50284 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LtbrP50284 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.76■□□□□ 0.43
LtbrP50284 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LtbrP50284 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 CT009738.1-201ENSMUST00000219031 809 ntBASIC17.76■□□□□ 0.43
LtbrP50284 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LtbrP50284 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms