Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-1P50220 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.61□□□□□ -0.39
Nkx2-1P50220 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.61□□□□□ -0.39
Nkx2-1P50220 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.61□□□□□ -0.39
Nkx2-1P50220 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.61□□□□□ -0.39
Nkx2-1P50220 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-1P50220 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.6□□□□□ -0.39
Nkx2-1P50220 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Gm18032-201ENSMUST00000222541 538 ntBASIC12.6□□□□□ -0.39
Nkx2-1P50220 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-1P50220 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.59□□□□□ -0.39
Nkx2-1P50220 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Gm10013-201ENSMUST00000106074 672 ntBASIC12.59□□□□□ -0.39
Nkx2-1P50220 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Gm11355-201ENSMUST00000121120 306 ntBASIC12.59□□□□□ -0.39
Nkx2-1P50220 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.59□□□□□ -0.39
Nkx2-1P50220 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Gm9987-201ENSMUST00000069768 567 ntBASIC12.59□□□□□ -0.39
Nkx2-1P50220 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms