Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Brca1P48754 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.82■□□□□ 0.28
Brca1P48754 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.82■□□□□ 0.28
Brca1P48754 Gm37230-201ENSMUST00000194491 818 ntBASIC16.82■□□□□ 0.28
Brca1P48754 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.82■□□□□ 0.28
Brca1P48754 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.82■□□□□ 0.28
Brca1P48754 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Brca1P48754 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.82■□□□□ 0.28
Brca1P48754 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Brca1P48754 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Brca1P48754 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Brca1P48754 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.82■□□□□ 0.28
Brca1P48754 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.82■□□□□ 0.28
Brca1P48754 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.82■□□□□ 0.28
Brca1P48754 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Brca1P48754 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Brca1P48754 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brca1P48754 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.81■□□□□ 0.28
Brca1P48754 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Brca1P48754 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.81■□□□□ 0.28
Brca1P48754 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Brca1P48754 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.81■□□□□ 0.28
Brca1P48754 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Brca1P48754 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.8■□□□□ 0.28
Brca1P48754 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.8■□□□□ 0.28
Brca1P48754 Olfr286-202ENSMUST00000205305 969 ntBASIC16.8■□□□□ 0.28
Brca1P48754 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Brca1P48754 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.8■□□□□ 0.28
Brca1P48754 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.8■□□□□ 0.28
Brca1P48754 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Brca1P48754 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Brca1P48754 Mir1897-201ENSMUST00000122581 272 ntBASIC16.8■□□□□ 0.28
Brca1P48754 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.8■□□□□ 0.28
Brca1P48754 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Brca1P48754 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brca1P48754 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.79■□□□□ 0.28
Brca1P48754 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.79■□□□□ 0.28
Brca1P48754 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.79■□□□□ 0.28
Brca1P48754 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brca1P48754 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Brca1P48754 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brca1P48754 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms