Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.32□□□□□ -0.28
GdnfP48540 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GdnfP48540 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.32□□□□□ -0.28
GdnfP48540 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Gm7367-201ENSMUST00000057611 492 ntBASIC13.32□□□□□ -0.28
GdnfP48540 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Gm15823-201ENSMUST00000064305 670 ntBASIC13.32□□□□□ -0.28
GdnfP48540 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GdnfP48540 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GdnfP48540 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
GdnfP48540 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.31□□□□□ -0.28
GdnfP48540 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.31□□□□□ -0.28
GdnfP48540 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.31□□□□□ -0.28
GdnfP48540 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GdnfP48540 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
GdnfP48540 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
GdnfP48540 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.31□□□□□ -0.28
GdnfP48540 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GdnfP48540 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GdnfP48540 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.3□□□□□ -0.28
GdnfP48540 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.3□□□□□ -0.28
GdnfP48540 Gm21362-201ENSMUST00000194272 928 ntBASIC13.3□□□□□ -0.28
GdnfP48540 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.3□□□□□ -0.28
GdnfP48540 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GdnfP48540 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.3□□□□□ -0.28
GdnfP48540 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
GdnfP48540 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GdnfP48540 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
GdnfP48540 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.3□□□□□ -0.28
GdnfP48540 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GdnfP48540 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.29□□□□□ -0.28
GdnfP48540 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.29□□□□□ -0.28
GdnfP48540 Gm13312-201ENSMUST00000119631 718 ntBASIC13.29□□□□□ -0.28
GdnfP48540 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms