Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps4bP46467 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vps4bP46467 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps4bP46467 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps4bP46467 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps4bP46467 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vps4bP46467 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps4bP46467 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps4bP46467 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.4■□□□□ 0.06
Vps4bP46467 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.4■□□□□ 0.06
Vps4bP46467 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.4■□□□□ 0.06
Vps4bP46467 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vps4bP46467 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Vps4bP46467 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.4■□□□□ 0.06
Vps4bP46467 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps4bP46467 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Vps4bP46467 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.39■□□□□ 0.05
Vps4bP46467 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.39■□□□□ 0.05
Vps4bP46467 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vps4bP46467 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Vps4bP46467 Gm8318-201ENSMUST00000182954 872 ntBASIC15.39■□□□□ 0.05
Vps4bP46467 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Vps4bP46467 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vps4bP46467 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps4bP46467 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.39■□□□□ 0.05
Vps4bP46467 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.38■□□□□ 0.05
Vps4bP46467 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Vps4bP46467 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps4bP46467 Mir8098-201ENSMUST00000184011 137 ntBASIC15.38■□□□□ 0.05
Vps4bP46467 Gm5864-201ENSMUST00000202263 970 ntBASIC15.38■□□□□ 0.05
Vps4bP46467 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.38■□□□□ 0.05
Vps4bP46467 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.38■□□□□ 0.05
Vps4bP46467 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Vps4bP46467 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Vps4bP46467 Grk6-207ENSMUST00000225925 2769 ntBASIC15.38■□□□□ 0.05
Vps4bP46467 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.38■□□□□ 0.05
Vps4bP46467 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Vps4bP46467 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vps4bP46467 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps4bP46467 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.38■□□□□ 0.05
Vps4bP46467 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps4bP46467 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.37■□□□□ 0.05
Vps4bP46467 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps4bP46467 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps4bP46467 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps4bP46467 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps4bP46467 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps4bP46467 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Vps4bP46467 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms