Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.66■□□□□ 0.1
Msh2P43247 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Msh2P43247 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Msh2P43247 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Msh2P43247 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.65■□□□□ 0.1
Msh2P43247 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.65■□□□□ 0.1
Msh2P43247 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.65■□□□□ 0.1
Msh2P43247 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.65■□□□□ 0.1
Msh2P43247 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.65■□□□□ 0.1
Msh2P43247 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.65■□□□□ 0.1
Msh2P43247 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Birc2-201ENSMUST00000054878 378 ntBASIC15.65■□□□□ 0.1
Msh2P43247 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.65■□□□□ 0.1
Msh2P43247 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msh2P43247 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Msh2P43247 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.64■□□□□ 0.09
Msh2P43247 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Msh2P43247 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Gm7153-201ENSMUST00000117092 455 ntBASIC15.64■□□□□ 0.09
Msh2P43247 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.64■□□□□ 0.09
Msh2P43247 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.64■□□□□ 0.09
Msh2P43247 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msh2P43247 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh2P43247 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.63■□□□□ 0.09
Msh2P43247 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh2P43247 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.63■□□□□ 0.09
Msh2P43247 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.63■□□□□ 0.09
Msh2P43247 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Msh2P43247 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.63■□□□□ 0.09
Msh2P43247 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.63■□□□□ 0.09
Msh2P43247 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.63■□□□□ 0.09
Msh2P43247 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh2P43247 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms