Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Gm7561-201ENSMUST00000211203 886 ntBASIC15.97■□□□□ 0.15
HttP42859 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.97■□□□□ 0.15
HttP42859 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HttP42859 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
HttP42859 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.96■□□□□ 0.15
HttP42859 Gm7584-201ENSMUST00000175829 940 ntBASIC15.96■□□□□ 0.15
HttP42859 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.96■□□□□ 0.15
HttP42859 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
HttP42859 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HttP42859 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.96■□□□□ 0.14
HttP42859 Gm18054-201ENSMUST00000207539 555 ntBASIC15.96■□□□□ 0.14
HttP42859 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HttP42859 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.95■□□□□ 0.14
HttP42859 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.95■□□□□ 0.14
HttP42859 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.95■□□□□ 0.14
HttP42859 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HttP42859 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HttP42859 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HttP42859 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HttP42859 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.94■□□□□ 0.14
HttP42859 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HttP42859 Gm13350-201ENSMUST00000120519 479 ntBASIC15.94■□□□□ 0.14
HttP42859 Gm6091-201ENSMUST00000098307 165 ntBASIC15.94■□□□□ 0.14
HttP42859 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.94■□□□□ 0.14
HttP42859 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HttP42859 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.94■□□□□ 0.14
HttP42859 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.94■□□□□ 0.14
HttP42859 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.94■□□□□ 0.14
HttP42859 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HttP42859 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.93■□□□□ 0.14
HttP42859 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.93■□□□□ 0.14
HttP42859 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.93■□□□□ 0.14
HttP42859 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.93■□□□□ 0.14
HttP42859 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HttP42859 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.93■□□□□ 0.14
HttP42859 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.93■□□□□ 0.14
HttP42859 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.93■□□□□ 0.14
HttP42859 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.93■□□□□ 0.14
HttP42859 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.93■□□□□ 0.14
HttP42859 Gm8463-201ENSMUST00000208573 613 ntBASIC15.93■□□□□ 0.14
HttP42859 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HttP42859 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HttP42859 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HttP42859 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HttP42859 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms