Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hmx3P42581 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmx3P42581 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Hmx3P42581 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Hmx3P42581 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmx3P42581 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmx3P42581 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
Hmx3P42581 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hmx3P42581 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Hmx3P42581 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmx3P42581 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hmx3P42581 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmx3P42581 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmx3P42581 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Gm37722-201ENSMUST00000193757 208 ntBASIC12.72□□□□□ -0.37
Hmx3P42581 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.72□□□□□ -0.37
Hmx3P42581 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmx3P42581 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.72□□□□□ -0.37
Hmx3P42581 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmx3P42581 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmx3P42581 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmx3P42581 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.71□□□□□ -0.37
Hmx3P42581 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.71□□□□□ -0.37
Hmx3P42581 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmx3P42581 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmx3P42581 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hmx3P42581 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hmx3P42581 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hmx3P42581 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmx3P42581 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmx3P42581 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmx3P42581 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmx3P42581 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmx3P42581 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.71□□□□□ -0.38
Hmx3P42581 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.71□□□□□ -0.38
Hmx3P42581 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hmx3P42581 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.7□□□□□ -0.38
Hmx3P42581 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.7□□□□□ -0.38
Hmx3P42581 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hmx3P42581 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hmx3P42581 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Hmx3P42581 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hmx3P42581 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.7□□□□□ -0.38
Hmx3P42581 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.7□□□□□ -0.38
Hmx3P42581 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmx3P42581 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.7□□□□□ -0.38
Hmx3P42581 Gm11355-201ENSMUST00000121120 306 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms