Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cxcl12P40224 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.56■□□□□ 0.08
Cxcl12P40224 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Cxcl12P40224 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cxcl12P40224 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cxcl12P40224 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.55■□□□□ 0.08
Cxcl12P40224 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Mir6420-201ENSMUST00000185032 102 ntBASIC15.55■□□□□ 0.08
Cxcl12P40224 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Gm37917-201ENSMUST00000194711 392 ntBASIC15.55■□□□□ 0.08
Cxcl12P40224 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Gm43630-201ENSMUST00000201550 776 ntBASIC15.55■□□□□ 0.08
Cxcl12P40224 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cxcl12P40224 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cxcl12P40224 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.54■□□□□ 0.08
Cxcl12P40224 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Gm11918-201ENSMUST00000121660 179 ntBASIC15.54■□□□□ 0.08
Cxcl12P40224 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cxcl12P40224 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cxcl12P40224 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Gm22189-201ENSMUST00000103822 86 ntBASIC15.53■□□□□ 0.08
Cxcl12P40224 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Gm3436-201ENSMUST00000179930 840 ntBASIC15.53■□□□□ 0.08
Cxcl12P40224 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Cxcl12P40224 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cxcl12P40224 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.53■□□□□ 0.08
Cxcl12P40224 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms