Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm9816-201ENSMUST00000122292 1414 ntBASIC19.87■□□□□ 0.77
Col18a1P39061 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col18a1P39061 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col18a1P39061 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col18a1P39061 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col18a1P39061 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.86■□□□□ 0.77
Col18a1P39061 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col18a1P39061 Gm44974-201ENSMUST00000206387 1279 ntBASIC19.86■□□□□ 0.77
Col18a1P39061 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col18a1P39061 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col18a1P39061 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col18a1P39061 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Col18a1P39061 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC19.86■□□□□ 0.77
Col18a1P39061 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC19.85■□□□□ 0.77
Col18a1P39061 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.85■□□□□ 0.77
Col18a1P39061 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.85■□□□□ 0.77
Col18a1P39061 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.85■□□□□ 0.77
Col18a1P39061 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Col18a1P39061 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC19.85■□□□□ 0.77
Col18a1P39061 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Gm7619-201ENSMUST00000210649 1282 ntBASIC19.85■□□□□ 0.77
Col18a1P39061 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col18a1P39061 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col18a1P39061 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Gm24196-201ENSMUST00000179161 110 ntBASIC19.84■□□□□ 0.77
Col18a1P39061 Gm38230-201ENSMUST00000193572 1159 ntBASIC19.84■□□□□ 0.77
Col18a1P39061 Gm18054-201ENSMUST00000207539 555 ntBASIC19.84■□□□□ 0.77
Col18a1P39061 AC125117.1-201ENSMUST00000228121 468 ntBASIC19.84■□□□□ 0.77
Col18a1P39061 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col18a1P39061 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col18a1P39061 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col18a1P39061 Gm27514-201ENSMUST00000183692 110 ntBASIC19.83■□□□□ 0.77
Col18a1P39061 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC19.83■□□□□ 0.77
Col18a1P39061 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col18a1P39061 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC19.83■□□□□ 0.77
Col18a1P39061 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.83■□□□□ 0.77
Col18a1P39061 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col18a1P39061 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col18a1P39061 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.83■□□□□ 0.77
Col18a1P39061 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col18a1P39061 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col18a1P39061 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col18a1P39061 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col18a1P39061 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC19.83■□□□□ 0.76
Col18a1P39061 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col18a1P39061 Gm29127-201ENSMUST00000188304 517 ntBASIC19.83■□□□□ 0.76
Col18a1P39061 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC19.83■□□□□ 0.76
Col18a1P39061 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col18a1P39061 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.82■□□□□ 0.76
Col18a1P39061 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.82■□□□□ 0.76
Col18a1P39061 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Mir3547-201ENSMUST00000175461 88 ntBASIC19.82■□□□□ 0.76
Col18a1P39061 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Col18a1P39061 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Gm8652-201ENSMUST00000181363 964 ntBASIC19.82■□□□□ 0.76
Col18a1P39061 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 AC156560.2-201ENSMUST00000221232 264 ntBASIC19.82■□□□□ 0.76
Col18a1P39061 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.82■□□□□ 0.76
Col18a1P39061 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.82■□□□□ 0.76
Col18a1P39061 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.82■□□□□ 0.76
Col18a1P39061 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Gm8775-201ENSMUST00000170943 1327 ntBASIC19.82■□□□□ 0.76
Col18a1P39061 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col18a1P39061 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.81■□□□□ 0.76
Col18a1P39061 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC19.81■□□□□ 0.76
Col18a1P39061 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Gm7561-201ENSMUST00000211203 886 ntBASIC19.81■□□□□ 0.76
Col18a1P39061 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC19.81■□□□□ 0.76
Col18a1P39061 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col18a1P39061 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col18a1P39061 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms