Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.04□□□□□ -0.16
Foxa1P35582 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxa1P35582 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Foxa1P35582 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxa1P35582 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Foxa1P35582 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.03□□□□□ -0.16
Foxa1P35582 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Gm27300-201ENSMUST00000184085 97 ntBASIC14.03□□□□□ -0.16
Foxa1P35582 Gm27335-201ENSMUST00000184758 97 ntBASIC14.03□□□□□ -0.16
Foxa1P35582 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.03□□□□□ -0.16
Foxa1P35582 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.03□□□□□ -0.16
Foxa1P35582 Gm18246-201ENSMUST00000221023 728 ntBASIC14.03□□□□□ -0.16
Foxa1P35582 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Foxa1P35582 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Foxa1P35582 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.03□□□□□ -0.16
Foxa1P35582 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxa1P35582 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Foxa1P35582 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Foxa1P35582 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxa1P35582 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Foxa1P35582 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxa1P35582 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Foxa1P35582 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Foxa1P35582 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Foxa1P35582 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.02□□□□□ -0.16
Foxa1P35582 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Foxa1P35582 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxa1P35582 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.02□□□□□ -0.17
Foxa1P35582 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxa1P35582 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Gm1401-201ENSMUST00000122048 772 ntBASIC14.02□□□□□ -0.17
Foxa1P35582 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxa1P35582 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxa1P35582 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.02□□□□□ -0.17
Foxa1P35582 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxa1P35582 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Foxa1P35582 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Foxa1P35582 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxa1P35582 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Foxa1P35582 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.01□□□□□ -0.17
Foxa1P35582 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Foxa1P35582 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.01□□□□□ -0.17
Foxa1P35582 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.01□□□□□ -0.17
Foxa1P35582 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.01□□□□□ -0.17
Foxa1P35582 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Foxa1P35582 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.01□□□□□ -0.17
Foxa1P35582 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.01□□□□□ -0.17
Foxa1P35582 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxa1P35582 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms