Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Slc6a11P31650 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Slc6a11P31650 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.4□□□□□ -0.1
Slc6a11P31650 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.4□□□□□ -0.1
Slc6a11P31650 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.4□□□□□ -0.1
Slc6a11P31650 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.4□□□□□ -0.1
Slc6a11P31650 Gm6296-201ENSMUST00000222599 943 ntBASIC14.4□□□□□ -0.1
Slc6a11P31650 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a11P31650 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Slc6a11P31650 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a11P31650 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Slc6a11P31650 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.39□□□□□ -0.11
Slc6a11P31650 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gm15165-201ENSMUST00000118140 502 ntBASIC14.39□□□□□ -0.11
Slc6a11P31650 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gm6736-201ENSMUST00000166583 948 ntBASIC14.39□□□□□ -0.11
Slc6a11P31650 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.39□□□□□ -0.11
Slc6a11P31650 Gm5364-201ENSMUST00000216789 889 ntBASIC14.39□□□□□ -0.11
Slc6a11P31650 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a11P31650 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a11P31650 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.38□□□□□ -0.11
Slc6a11P31650 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Slc6a11P31650 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc6a11P31650 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc6a11P31650 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.38□□□□□ -0.11
Slc6a11P31650 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.38□□□□□ -0.11
Slc6a11P31650 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.38□□□□□ -0.11
Slc6a11P31650 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.38□□□□□ -0.11
Slc6a11P31650 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.38□□□□□ -0.11
Slc6a11P31650 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Slc6a11P31650 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a11P31650 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms