Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nedd8P29595 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.09□□□□□ -0.15
Nedd8P29595 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nedd8P29595 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nedd8P29595 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nedd8P29595 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nedd8P29595 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nedd8P29595 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nedd8P29595 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nedd8P29595 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nedd8P29595 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.08□□□□□ -0.16
Nedd8P29595 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Nedd8P29595 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nedd8P29595 Gm6257-201ENSMUST00000163864 910 ntBASIC14.08□□□□□ -0.16
Nedd8P29595 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Nedd8P29595 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Nedd8P29595 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.08□□□□□ -0.16
Nedd8P29595 Gm7367-201ENSMUST00000057611 492 ntBASIC14.08□□□□□ -0.16
Nedd8P29595 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.08□□□□□ -0.16
Nedd8P29595 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.08□□□□□ -0.16
Nedd8P29595 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Nedd8P29595 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.08□□□□□ -0.16
Nedd8P29595 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nedd8P29595 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nedd8P29595 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Nedd8P29595 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.07□□□□□ -0.16
Nedd8P29595 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Gm11539-201ENSMUST00000119837 557 ntBASIC14.07□□□□□ -0.16
Nedd8P29595 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nedd8P29595 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nedd8P29595 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nedd8P29595 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nedd8P29595 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nedd8P29595 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nedd8P29595 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.06□□□□□ -0.16
Nedd8P29595 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nedd8P29595 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nedd8P29595 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.06□□□□□ -0.16
Nedd8P29595 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Nedd8P29595 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Nedd8P29595 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms