Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Pde6aP27664 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.58■□□□□ 0.4
Pde6aP27664 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pde6aP27664 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.58■□□□□ 0.4
Pde6aP27664 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6aP27664 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pde6aP27664 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pde6aP27664 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.57■□□□□ 0.4
Pde6aP27664 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.57■□□□□ 0.4
Pde6aP27664 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.57■□□□□ 0.4
Pde6aP27664 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.57■□□□□ 0.4
Pde6aP27664 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pde6aP27664 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.57■□□□□ 0.4
Pde6aP27664 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.57■□□□□ 0.4
Pde6aP27664 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Pde6aP27664 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6aP27664 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Pde6aP27664 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pde6aP27664 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.56■□□□□ 0.4
Pde6aP27664 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Pde6aP27664 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Gm15467-201ENSMUST00000120582 445 ntBASIC17.56■□□□□ 0.4
Pde6aP27664 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.56■□□□□ 0.4
Pde6aP27664 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pde6aP27664 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.56■□□□□ 0.4
Pde6aP27664 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.56■□□□□ 0.4
Pde6aP27664 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pde6aP27664 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pde6aP27664 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Pde6aP27664 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6aP27664 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Pde6aP27664 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Gm14494-201ENSMUST00000118786 435 ntBASIC17.55■□□□□ 0.4
Pde6aP27664 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.55■□□□□ 0.4
Pde6aP27664 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.55■□□□□ 0.4
Pde6aP27664 Gm45747-201ENSMUST00000212203 999 ntBASIC17.55■□□□□ 0.4
Pde6aP27664 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.55■□□□□ 0.4
Pde6aP27664 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6aP27664 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms