Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.91□□□□□ -0.18
Hmgn1P18608 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hmgn1P18608 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hmgn1P18608 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Gm15565-201ENSMUST00000118890 427 ntBASIC13.9□□□□□ -0.18
Hmgn1P18608 Gm8344-201ENSMUST00000119813 856 ntBASIC13.9□□□□□ -0.18
Hmgn1P18608 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.9□□□□□ -0.18
Hmgn1P18608 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgn1P18608 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.9□□□□□ -0.18
Hmgn1P18608 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.9□□□□□ -0.19
Hmgn1P18608 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hmgn1P18608 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Gm15794-201ENSMUST00000120182 631 ntBASIC13.89□□□□□ -0.19
Hmgn1P18608 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Gm6345-202ENSMUST00000180900 204 ntBASIC13.89□□□□□ -0.19
Hmgn1P18608 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.89□□□□□ -0.19
Hmgn1P18608 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.89□□□□□ -0.19
Hmgn1P18608 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgn1P18608 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.89□□□□□ -0.19
Hmgn1P18608 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Hmgn1P18608 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Hmgn1P18608 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Celf4-206ENSMUST00000224553 1729 ntBASIC13.88□□□□□ -0.19
Hmgn1P18608 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgn1P18608 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hmgn1P18608 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Gm44454-201ENSMUST00000198541 138 ntBASIC13.88□□□□□ -0.19
Hmgn1P18608 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.88□□□□□ -0.19
Hmgn1P18608 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgn1P18608 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgn1P18608 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms