Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp53P15975 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Usp53P15975 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp53P15975 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp53P15975 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp53P15975 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp53P15975 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp53P15975 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.51■□□□□ 0.39
Usp53P15975 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp53P15975 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.51■□□□□ 0.39
Usp53P15975 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Usp53P15975 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.51■□□□□ 0.39
Usp53P15975 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp53P15975 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp53P15975 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp53P15975 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Usp53P15975 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.5■□□□□ 0.39
Usp53P15975 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp53P15975 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Usp53P15975 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp53P15975 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp53P15975 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Mir1895-201ENSMUST00000122615 79 ntBASIC17.5■□□□□ 0.39
Usp53P15975 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp53P15975 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp53P15975 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp53P15975 Celf4-206ENSMUST00000224553 1729 ntBASIC17.5■□□□□ 0.39
Usp53P15975 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp53P15975 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Usp53P15975 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp53P15975 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp53P15975 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp53P15975 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Gm44335-201ENSMUST00000196879 141 ntBASIC17.49■□□□□ 0.39
Usp53P15975 Gm44297-201ENSMUST00000198304 141 ntBASIC17.49■□□□□ 0.39
Usp53P15975 Gm44346-201ENSMUST00000198851 141 ntBASIC17.49■□□□□ 0.39
Usp53P15975 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp53P15975 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp53P15975 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp53P15975 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp53P15975 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp53P15975 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp53P15975 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp53P15975 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms