Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl1P12850 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl1P12850 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cxcl1P12850 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cxcl1P12850 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Cxcl1P12850 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Gm8344-201ENSMUST00000119813 856 ntBASIC12.58□□□□□ -0.4
Cxcl1P12850 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Mir3081-201ENSMUST00000175305 84 ntBASIC12.58□□□□□ -0.4
Cxcl1P12850 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcl1P12850 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cxcl1P12850 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm29518-201ENSMUST00000190858 372 ntBASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm18622-201ENSMUST00000219361 595 ntBASIC12.57□□□□□ -0.4
Cxcl1P12850 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcl1P12850 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.57□□□□□ -0.4
Cxcl1P12850 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.57□□□□□ -0.4
Cxcl1P12850 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcl1P12850 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcl1P12850 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl1P12850 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl1P12850 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl1P12850 Gm25016-201ENSMUST00000158399 131 ntBASIC12.56□□□□□ -0.4
Cxcl1P12850 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms