Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Gm14859-201ENSMUST00000117752 357 ntBASIC16.43■□□□□ 0.22
RaraP11416 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Gm27646-201ENSMUST00000183989 110 ntBASIC16.43■□□□□ 0.22
RaraP11416 Gm17807-201ENSMUST00000186869 298 ntBASIC16.43■□□□□ 0.22
RaraP11416 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.43■□□□□ 0.22
RaraP11416 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
RaraP11416 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RaraP11416 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RaraP11416 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RaraP11416 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RaraP11416 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.42■□□□□ 0.22
RaraP11416 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RaraP11416 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RaraP11416 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RaraP11416 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RaraP11416 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RaraP11416 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.41■□□□□ 0.22
RaraP11416 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.41■□□□□ 0.22
RaraP11416 Gm11780-201ENSMUST00000136880 516 ntBASIC16.41■□□□□ 0.22
RaraP11416 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.41■□□□□ 0.22
RaraP11416 Gm7977-201ENSMUST00000193787 748 ntBASIC16.41■□□□□ 0.22
RaraP11416 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Gm6296-201ENSMUST00000222599 943 ntBASIC16.41■□□□□ 0.22
RaraP11416 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.41■□□□□ 0.22
RaraP11416 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.41■□□□□ 0.22
RaraP11416 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RaraP11416 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.4■□□□□ 0.22
RaraP11416 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RaraP11416 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.4■□□□□ 0.22
RaraP11416 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.4■□□□□ 0.22
RaraP11416 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.4■□□□□ 0.22
RaraP11416 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.4■□□□□ 0.22
RaraP11416 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
RaraP11416 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RaraP11416 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RaraP11416 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RaraP11416 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms