Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.36□□□□□ -0.27
Ccl3P10855 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ccl3P10855 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Ccl3P10855 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ccl3P10855 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccl3P10855 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccl3P10855 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.35□□□□□ -0.27
Ccl3P10855 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccl3P10855 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccl3P10855 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccl3P10855 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.34□□□□□ -0.27
Ccl3P10855 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Ccl3P10855 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccl3P10855 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.34□□□□□ -0.27
Ccl3P10855 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccl3P10855 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ccl3P10855 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ccl3P10855 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ccl3P10855 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccl3P10855 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.34□□□□□ -0.27
Ccl3P10855 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccl3P10855 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ccl3P10855 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl3P10855 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl3P10855 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl3P10855 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl3P10855 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Ccl3P10855 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl3P10855 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl3P10855 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl3P10855 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccl3P10855 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccl3P10855 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccl3P10855 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl3P10855 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ccl3P10855 Gm14767-201ENSMUST00000121559 586 ntBASIC13.33□□□□□ -0.28
Ccl3P10855 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms