Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.19□□□□□ -0.3
PtcraP0C6B2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PtcraP0C6B2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PtcraP0C6B2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PtcraP0C6B2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PtcraP0C6B2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PtcraP0C6B2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PtcraP0C6B2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.18□□□□□ -0.3
PtcraP0C6B2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Gm43767-201ENSMUST00000198933 381 ntBASIC13.18□□□□□ -0.3
PtcraP0C6B2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PtcraP0C6B2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.17□□□□□ -0.3
PtcraP0C6B2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.17□□□□□ -0.3
PtcraP0C6B2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gm15590-201ENSMUST00000078419 552 ntBASIC13.17□□□□□ -0.3
PtcraP0C6B2 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.17□□□□□ -0.3
PtcraP0C6B2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PtcraP0C6B2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Gm27628-201ENSMUST00000184911 107 ntBASIC13.16□□□□□ -0.3
PtcraP0C6B2 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.16□□□□□ -0.3
PtcraP0C6B2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PtcraP0C6B2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms