Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Hoxc8P09025 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Syt7-204ENSMUST00000223586 1344 ntBASIC16.06■□□□□ 0.16
Hoxc8P09025 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Gm7488-201ENSMUST00000117148 684 ntBASIC16.06■□□□□ 0.16
Hoxc8P09025 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Hoxc8P09025 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
Hoxc8P09025 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hoxc8P09025 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm8749-201ENSMUST00000117737 331 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm5745-201ENSMUST00000183748 313 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm29310-201ENSMUST00000185468 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21825-201ENSMUST00000185728 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm29109-201ENSMUST00000185895 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21896-201ENSMUST00000186520 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21873-201ENSMUST00000186728 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21794-201ENSMUST00000187056 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21880-201ENSMUST00000187275 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21826-201ENSMUST00000187451 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21198-201ENSMUST00000188393 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21749-201ENSMUST00000189343 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21901-201ENSMUST00000189568 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm29424-201ENSMUST00000189716 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm28599-201ENSMUST00000189838 694 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21867-201ENSMUST00000189917 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm29269-201ENSMUST00000190087 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21722-201ENSMUST00000190153 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm28423-201ENSMUST00000190701 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21899-201ENSMUST00000190745 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21910-201ENSMUST00000191163 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21849-201ENSMUST00000191571 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm28678-201ENSMUST00000191593 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm20910-201ENSMUST00000193268 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm21871-201ENSMUST00000194621 696 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm2451-201ENSMUST00000199447 999 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm10290-201ENSMUST00000200451 999 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hoxc8P09025 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hoxc8P09025 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.05■□□□□ 0.16
Hoxc8P09025 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Hoxc8P09025 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Gm15321-201ENSMUST00000121290 288 ntBASIC16.04■□□□□ 0.16
Hoxc8P09025 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.04■□□□□ 0.16
Hoxc8P09025 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.04■□□□□ 0.16
Hoxc8P09025 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.04■□□□□ 0.16
Hoxc8P09025 Gm45098-201ENSMUST00000207179 657 ntBASIC16.04■□□□□ 0.16
Hoxc8P09025 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hoxc8P09025 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hoxc8P09025 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hoxc8P09025 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms