Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ApoeP08226 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.38□□□□□ -0.11
ApoeP08226 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.37□□□□□ -0.11
ApoeP08226 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.37□□□□□ -0.11
ApoeP08226 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ApoeP08226 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Gm19164-201ENSMUST00000210667 640 ntBASIC14.37□□□□□ -0.11
ApoeP08226 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ApoeP08226 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ApoeP08226 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ApoeP08226 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ApoeP08226 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Gm23547-201ENSMUST00000158210 271 ntBASIC14.36□□□□□ -0.11
ApoeP08226 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.36□□□□□ -0.11
ApoeP08226 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.36□□□□□ -0.11
ApoeP08226 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.36□□□□□ -0.11
ApoeP08226 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ApoeP08226 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ApoeP08226 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ApoeP08226 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ApoeP08226 Gm13312-201ENSMUST00000119631 718 ntBASIC14.35□□□□□ -0.11
ApoeP08226 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Gm9013-201ENSMUST00000132939 882 ntBASIC14.35□□□□□ -0.11
ApoeP08226 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Gm6623-201ENSMUST00000173570 544 ntBASIC14.35□□□□□ -0.11
ApoeP08226 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Gm9172-201ENSMUST00000212092 954 ntBASIC14.35□□□□□ -0.11
ApoeP08226 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ApoeP08226 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ApoeP08226 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.35□□□□□ -0.11
ApoeP08226 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.35□□□□□ -0.11
ApoeP08226 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ApoeP08226 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ApoeP08226 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms