Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm26039-201ENSMUST00000158152 144 ntBASIC13.36□□□□□ -0.27
P04224 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.36□□□□□ -0.27
P04224 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
P04224 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
P04224 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P04224 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
P04224 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
P04224 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
P04224 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Gm37055-201ENSMUST00000191866 133 ntBASIC13.35□□□□□ -0.27
P04224 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.35□□□□□ -0.27
P04224 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.35□□□□□ -0.27
P04224 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.35□□□□□ -0.27
P04224 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P04224 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
P04224 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.35□□□□□ -0.27
P04224 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
P04224 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
P04224 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
P04224 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.34□□□□□ -0.27
P04224 Mir5130-201ENSMUST00000175160 84 ntBASIC13.34□□□□□ -0.27
P04224 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
P04224 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.34□□□□□ -0.27
P04224 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
P04224 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.34□□□□□ -0.27
P04224 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P04224 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.34□□□□□ -0.27
P04224 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P04224 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
P04224 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P04224 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P04224 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.33□□□□□ -0.28
P04224 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P04224 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
P04224 Mir1668-201ENSMUST00000184114 107 ntBASIC13.33□□□□□ -0.28
P04224 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P04224 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.33□□□□□ -0.28
P04224 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
P04224 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms