Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.75□□□□□ -0.37
Hoxa3P02831 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxa3P02831 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.74□□□□□ -0.37
Hoxa3P02831 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.74□□□□□ -0.37
Hoxa3P02831 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Gm13597-201ENSMUST00000121239 375 ntBASIC12.74□□□□□ -0.37
Hoxa3P02831 Gm18489-201ENSMUST00000172565 551 ntBASIC12.74□□□□□ -0.37
Hoxa3P02831 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.74□□□□□ -0.37
Hoxa3P02831 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.74□□□□□ -0.37
Hoxa3P02831 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.74□□□□□ -0.37
Hoxa3P02831 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxa3P02831 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxa3P02831 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Hoxa3P02831 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Mir3113-201ENSMUST00000175478 76 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Gm43575-201ENSMUST00000196420 516 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxa3P02831 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.73□□□□□ -0.37
Hoxa3P02831 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxa3P02831 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxa3P02831 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms