Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm45167-201ENSMUST00000208007 322 ntBASIC13.89□□□□□ -0.19
P01852 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P01852 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
P01852 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.89□□□□□ -0.19
P01852 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01852 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
P01852 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
P01852 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.88□□□□□ -0.19
P01852 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.88□□□□□ -0.19
P01852 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
P01852 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.88□□□□□ -0.19
P01852 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.88□□□□□ -0.19
P01852 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.88□□□□□ -0.19
P01852 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.88□□□□□ -0.19
P01852 Gm5364-201ENSMUST00000216789 889 ntBASIC13.88□□□□□ -0.19
P01852 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
P01852 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.88□□□□□ -0.19
P01852 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
P01852 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
P01852 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.88□□□□□ -0.19
P01852 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
P01852 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.88□□□□□ -0.19
P01852 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01852 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
P01852 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P01852 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P01852 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.87□□□□□ -0.19
P01852 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
P01852 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
P01852 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.87□□□□□ -0.19
P01852 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.87□□□□□ -0.19
P01852 Gm8318-201ENSMUST00000182954 872 ntBASIC13.87□□□□□ -0.19
P01852 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.87□□□□□ -0.19
P01852 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
P01852 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
P01852 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
P01852 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.87□□□□□ -0.19
P01852 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01852 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01852 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01852 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01852 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
P01852 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01852 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.86□□□□□ -0.19
P01852 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.86□□□□□ -0.19
P01852 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
P01852 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01852 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01852 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
P01852 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms