Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sp1O89090 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Rprl2-201ENSMUST00000157150 290 ntBASIC15.29■□□□□ 0.04
Sp1O89090 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.29■□□□□ 0.04
Sp1O89090 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Sp1O89090 Gm8396-201ENSMUST00000057361 823 ntBASIC15.29■□□□□ 0.04
Sp1O89090 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.29■□□□□ 0.04
Sp1O89090 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Sp1O89090 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Sp1O89090 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.29■□□□□ 0.04
Sp1O89090 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp1O89090 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.28■□□□□ 0.04
Sp1O89090 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Sp1O89090 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Sp1O89090 Gm14701-201ENSMUST00000117156 348 ntBASIC15.28■□□□□ 0.04
Sp1O89090 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.28■□□□□ 0.04
Sp1O89090 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Gm18889-201ENSMUST00000174284 929 ntBASIC15.28■□□□□ 0.04
Sp1O89090 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sp1O89090 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.28■□□□□ 0.04
Sp1O89090 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.28■□□□□ 0.04
Sp1O89090 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.28■□□□□ 0.04
Sp1O89090 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.28■□□□□ 0.04
Sp1O89090 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.28■□□□□ 0.04
Sp1O89090 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp1O89090 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.28■□□□□ 0.04
Sp1O89090 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sp1O89090 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sp1O89090 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.27■□□□□ 0.04
Sp1O89090 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.27■□□□□ 0.04
Sp1O89090 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.27■□□□□ 0.04
Sp1O89090 Mir6990-201ENSMUST00000183724 91 ntBASIC15.27■□□□□ 0.04
Sp1O89090 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.27■□□□□ 0.04
Sp1O89090 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.27■□□□□ 0.04
Sp1O89090 Gm18057-201ENSMUST00000208220 503 ntBASIC15.27■□□□□ 0.04
Sp1O89090 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Sp1O89090 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp1O89090 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Sp1O89090 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sp1O89090 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sp1O89090 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sp1O89090 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.26■□□□□ 0.03
Sp1O89090 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.26■□□□□ 0.03
Sp1O89090 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.26■□□□□ 0.03
Sp1O89090 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sp1O89090 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.26■□□□□ 0.03
Sp1O89090 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sp1O89090 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms