Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Matn4O89029 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Matn4O89029 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Matn4O89029 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.34□□□□□ -0.11
Matn4O89029 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Matn4O89029 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.34□□□□□ -0.11
Matn4O89029 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 Gm6659-201ENSMUST00000174752 547 ntBASIC14.34□□□□□ -0.11
Matn4O89029 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Matn4O89029 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Carlr-201ENSMUST00000181515 2574 ntBASIC14.34□□□□□ -0.11
Matn4O89029 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Matn4O89029 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Matn4O89029 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Matn4O89029 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.33□□□□□ -0.11
Matn4O89029 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Matn4O89029 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.33□□□□□ -0.11
Matn4O89029 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Matn4O89029 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Matn4O89029 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.33□□□□□ -0.12
Matn4O89029 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Matn4O89029 Gm8655-201ENSMUST00000221159 852 ntBASIC14.33□□□□□ -0.12
Matn4O89029 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.33□□□□□ -0.12
Matn4O89029 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.33□□□□□ -0.12
Matn4O89029 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.33□□□□□ -0.12
Matn4O89029 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Matn4O89029 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.33□□□□□ -0.12
Matn4O89029 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Matn4O89029 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Matn4O89029 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Matn4O89029 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.32□□□□□ -0.12
Matn4O89029 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Matn4O89029 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Matn4O89029 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Matn4O89029 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Matn4O89029 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms