Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.39□□□□□ -0.11
Tgfbr3O88393 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tgfbr3O88393 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Gm27989-201ENSMUST00000184721 107 ntBASIC14.38□□□□□ -0.11
Tgfbr3O88393 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.38□□□□□ -0.11
Tgfbr3O88393 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tgfbr3O88393 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gm8410-201ENSMUST00000117225 605 ntBASIC14.37□□□□□ -0.11
Tgfbr3O88393 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.37□□□□□ -0.11
Tgfbr3O88393 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.37□□□□□ -0.11
Tgfbr3O88393 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tgfbr3O88393 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.36□□□□□ -0.11
Tgfbr3O88393 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Gm13453-201ENSMUST00000118708 357 ntBASIC14.36□□□□□ -0.11
Tgfbr3O88393 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Mir8102-201ENSMUST00000184148 139 ntBASIC14.36□□□□□ -0.11
Tgfbr3O88393 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tgfbr3O88393 Gm6888-201ENSMUST00000221983 706 ntBASIC14.36□□□□□ -0.11
Tgfbr3O88393 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms