Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ttc3O88196 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ttc3O88196 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ttc3O88196 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.8■□□□□ 0.12
Ttc3O88196 Gm28630-201ENSMUST00000187806 498 ntBASIC15.8■□□□□ 0.12
Ttc3O88196 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.8■□□□□ 0.12
Ttc3O88196 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ttc3O88196 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Ttc3O88196 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ttc3O88196 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ttc3O88196 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ttc3O88196 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.8■□□□□ 0.12
Ttc3O88196 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Gm27430-201ENSMUST00000184585 107 ntBASIC15.8■□□□□ 0.12
Ttc3O88196 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Gm44333-201ENSMUST00000197168 107 ntBASIC15.8■□□□□ 0.12
Ttc3O88196 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ttc3O88196 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.8■□□□□ 0.12
Ttc3O88196 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ttc3O88196 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Gm24158-201ENSMUST00000175263 71 ntBASIC15.79■□□□□ 0.12
Ttc3O88196 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.79■□□□□ 0.12
Ttc3O88196 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.79■□□□□ 0.12
Ttc3O88196 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.79■□□□□ 0.12
Ttc3O88196 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.79■□□□□ 0.12
Ttc3O88196 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.79■□□□□ 0.12
Ttc3O88196 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ttc3O88196 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.79■□□□□ 0.12
Ttc3O88196 Gm6415-201ENSMUST00000118488 348 ntBASIC15.78■□□□□ 0.12
Ttc3O88196 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.78■□□□□ 0.12
Ttc3O88196 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ttc3O88196 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms