Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.11■□□□□ 0.01
Pknox1O70477 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pknox1O70477 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pknox1O70477 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.11■□□□□ 0.01
Pknox1O70477 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.11■□□□□ 0.01
Pknox1O70477 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pknox1O70477 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pknox1O70477 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.1■□□□□ 0.01
Pknox1O70477 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pknox1O70477 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.1■□□□□ 0.01
Pknox1O70477 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.1■□□□□ 0.01
Pknox1O70477 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Gm15358-201ENSMUST00000119249 520 ntBASIC15.1■□□□□ 0.01
Pknox1O70477 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pknox1O70477 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pknox1O70477 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.1■□□□□ 0.01
Pknox1O70477 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Pknox1O70477 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pknox1O70477 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Pknox1O70477 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Gm8097-201ENSMUST00000117903 829 ntBASIC15.09■□□□□ 0.01
Pknox1O70477 Gm12644-201ENSMUST00000119935 606 ntBASIC15.09■□□□□ 0.01
Pknox1O70477 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Pknox1O70477 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.09■□□□□ 0.01
Pknox1O70477 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.09■□□□□ 0.01
Pknox1O70477 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.09■□□□□ 0.01
Pknox1O70477 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pknox1O70477 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pknox1O70477 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pknox1O70477 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pknox1O70477 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms